Carnation DB

Dca43497.1

Annotation

8-exons
f-1
sp|F6H698_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0091g00290#GO:0005634;GO:0043565;GO:0003700;GO:0008270#3F0P1C
Os06t0229300-01 Similar to Hox2b protein.
Repeat List (scaffold496)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43497.1	464	1007	1057	26.96	544	49	2e-124
Target_name	Start	End	Length	Cov(%)
sp\|F6H698_VITVI	212	783	968	59.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43497.1	466	957	1057	22.98	492	45	1e-107
Target_name	Start	End	Length	Cov(%)
Os06t0229300-01	150	669	793	65.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold496	Augustus	mRNA	127307	132947	.	+	.	ID=Dca43497.1;Parent=Dca43497
scaffold496	Augustus	exon	127307	128820	.	+	.	ID=Dca43497.1.exon1;Parent=Dca43497.1
scaffold496	Augustus	exon	130184	130349	.	+	.	ID=Dca43497.1.exon2;Parent=Dca43497.1
scaffold496	Augustus	exon	130433	130556	.	+	.	ID=Dca43497.1.exon3;Parent=Dca43497.1
scaffold496	Augustus	exon	130655	130767	.	+	.	ID=Dca43497.1.exon4;Parent=Dca43497.1
scaffold496	Augustus	exon	130875	131369	.	+	.	ID=Dca43497.1.exon5;Parent=Dca43497.1
scaffold496	Augus-PASA	exon	131667	131972	.	+	.	ID=Dca43497.1.exon6;Parent=Dca43497.1
scaffold496	Augus-PASA	exon	132410	132499	.	+	.	ID=Dca43497.1.exon7;Parent=Dca43497.1
scaffold496	Augus-PASA	exon	132582	132947	.	+	.	ID=Dca43497.1.exon8;Parent=Dca43497.1