Carnation DB

Dca43508.1

Annotation

6-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
sp|Q7XRT2_ORYSJ#OSJNBa0042F21.11 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0042F21.11#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold4963)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43508.1	162	768	887	31	607	40	6e-118
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	12	690	1717	39.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43508.1	581	672	887	3.15	92	31	8e-10
Target_name	Start	End	Length	Cov(%)
Os12t0292200-01	98	189	192	47.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4963	Augustus	mRNA	7410	11800	.	-	.	ID=Dca43508.1;Parent=Dca43508
scaffold4963	Augustus	exon	7410	7769	.	-	.	ID=Dca43508.1.exon1;Parent=Dca43508.1
scaffold4963	Augustus	exon	7855	8475	.	-	.	ID=Dca43508.1.exon2;Parent=Dca43508.1
scaffold4963	Augustus	exon	8537	8646	.	-	.	ID=Dca43508.1.exon3;Parent=Dca43508.1
scaffold4963	Augustus	exon	8734	9182	.	-	.	ID=Dca43508.1.exon4;Parent=Dca43508.1
scaffold4963	Augustus	exon	9278	10117	.	-	.	ID=Dca43508.1.exon5;Parent=Dca43508.1
scaffold4963	Augustus	exon	11517	11800	.	-	.	ID=Dca43508.1.exon6;Parent=Dca43508.1