Dca43511.1
Annotation
- 3-exons
- f-1
- sp|B9N840_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_584573#unknown#0F0P0C
- AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:14722314-14723635 FORWARD LENGTH=415
- Repeat List (scaffold4964)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43511.1 |
108 |
208 |
208 |
30.76 |
101 |
64 |
6e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N840_POPTR |
179 |
279 |
428 |
23.59 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43511.1 |
108 |
208 |
208 |
27.4 |
101 |
57 |
3e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G42630.1 |
166 |
266 |
415 |
24.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4964 |
Augus-PASA |
mRNA |
1116 |
2966 |
. |
+ |
. |
ID=Dca43511.1;Parent=Dca43511 |
| scaffold4964 |
Augus-PASA |
exon |
1116 |
1367 |
. |
+ |
. |
ID=Dca43511.1.exon1;Parent=Dca43511.1 |
| scaffold4964 |
Augus-PASA |
exon |
1452 |
1521 |
. |
+ |
. |
ID=Dca43511.1.exon2;Parent=Dca43511.1 |
| scaffold4964 |
Augustus |
exon |
2662 |
2966 |
. |
+ |
. |
ID=Dca43511.1.exon3;Parent=Dca43511.1 |
