Carnation DB

Dca43525.1

Annotation

9-exons
f-1
sp|E0CV20_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0050g00450#GO:0003677;GO:0003899#2F0P0C
sp|B9R9A5_RICCO#DNA-directed RNA polymerase III 62 kDa polypeptide, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1495680#GO:0003677;GO:0003899#2F0P0C
Repeat List (scaffold4965)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43525.1	1	315	317	46.05	315	45	4e-66
Target_name	Start	End	Length	Cov(%)
sp\|E0CV20_VITVI	211	524	524	59.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43525.1	1	315	317	37.85	315	37	1e-51
Target_name	Start	End	Length	Cov(%)
AT3G49000.1	207	523	523	60.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4965	Augustus	mRNA	37082	40642	.	-	.	ID=Dca43525.1;Parent=Dca43525
scaffold4965	Augustus	exon	37082	37231	.	-	.	ID=Dca43525.1.exon1;Parent=Dca43525.1
scaffold4965	Augustus	exon	37832	37984	.	-	.	ID=Dca43525.1.exon2;Parent=Dca43525.1
scaffold4965	Augustus	exon	38631	38714	.	-	.	ID=Dca43525.1.exon3;Parent=Dca43525.1
scaffold4965	Augustus	exon	39098	39187	.	-	.	ID=Dca43525.1.exon4;Parent=Dca43525.1
scaffold4965	Augustus	exon	39269	39306	.	-	.	ID=Dca43525.1.exon5;Parent=Dca43525.1
scaffold4965	Augustus	exon	39403	39537	.	-	.	ID=Dca43525.1.exon6;Parent=Dca43525.1
scaffold4965	Augustus	exon	40180	40273	.	-	.	ID=Dca43525.1.exon7;Parent=Dca43525.1
scaffold4965	Augustus	exon	40350	40460	.	-	.	ID=Dca43525.1.exon8;Parent=Dca43525.1
scaffold4965	Augustus	exon	40544	40642	.	-	.	ID=Dca43525.1.exon9;Parent=Dca43525.1