Dca43563.1
Annotation
- 4-exons
- f-1
- sp|B9IFI1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_776343#GO:0005524#1F0P0C
- AT3G48770.1 | Symbols: | DNA binding;ATP binding | chr3:18079261-18086817 REVERSE LENGTH=1899
- Repeat List (scaffold4971)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43563.1 |
413 |
475 |
823 |
3.76 |
63 |
50 |
2e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IFI1_POPTR |
1266 |
1322 |
1356 |
4.2 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43563.1 |
2 |
822 |
823 |
55.52 |
821 |
56 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G48770.1 |
194 |
1010 |
1899 |
43.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4971 |
Augustus |
mRNA |
39542 |
43820 |
. |
+ |
. |
ID=Dca43563.1;Parent=Dca43563 |
| scaffold4971 |
Augustus |
exon |
39542 |
39706 |
. |
+ |
. |
ID=Dca43563.1.exon1;Parent=Dca43563.1 |
| scaffold4971 |
Augustus |
exon |
41161 |
41371 |
. |
+ |
. |
ID=Dca43563.1.exon2;Parent=Dca43563.1 |
| scaffold4971 |
Augustus |
exon |
41594 |
43681 |
. |
+ |
. |
ID=Dca43563.1.exon3;Parent=Dca43563.1 |
| scaffold4971 |
Augustus |
exon |
43813 |
43820 |
. |
+ |
. |
ID=Dca43563.1.exon4;Parent=Dca43563.1 |
