Carnation DB

Dca43583.1

Annotation

7-exons
f-1
sp|D7T0N8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0065g00460#GO:0005488#1F0P0C
sp|B9SP95_RICCO#Microtubule-associated protein TORTIFOLIA1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0588940#GO:0005488#1F0P0C
Repeat List (scaffold4977)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43583.1	1	830	867	50.74	830	53	0
Target_name	Start	End	Length	Cov(%)
sp\|D7T0N8_VITVI	1	826	831	99.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43583.1	1	830	867	42.09	830	43	9e-167
Target_name	Start	End	Length	Cov(%)
AT2G07170.1	1	816	820	99.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4977	Augustus	mRNA	28514	32769	.	-	.	ID=Dca43583.1;Parent=Dca43583
scaffold4977	Augustus	exon	28514	28626	.	-	.	ID=Dca43583.1.exon1;Parent=Dca43583.1
scaffold4977	Augustus	exon	28753	28918	.	-	.	ID=Dca43583.1.exon2;Parent=Dca43583.1
scaffold4977	Augustus	exon	29555	30268	.	-	.	ID=Dca43583.1.exon3;Parent=Dca43583.1
scaffold4977	Augustus	exon	30547	31208	.	-	.	ID=Dca43583.1.exon4;Parent=Dca43583.1
scaffold4977	Augustus	exon	31397	31499	.	-	.	ID=Dca43583.1.exon5;Parent=Dca43583.1
scaffold4977	Augustus	exon	31610	31804	.	-	.	ID=Dca43583.1.exon6;Parent=Dca43583.1
scaffold4977	Augustus	exon	32119	32769	.	-	.	ID=Dca43583.1.exon7;Parent=Dca43583.1