Carnation DB

Dca43594.1

Annotation

5-exons
f-1
sp|B9HF05_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_832385#GO:0005622;GO:0005525;GO:0007264#1F1P1C
sp|B9S683_RICCO#ADP-ribosylation factor, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0533080#GO:0005622;GO:0005525;GO:0007264#1F1P1C
Repeat List (scaffold498)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43594.1	1	185	185	92.97	185	93	3e-97
Target_name	Start	End	Length	Cov(%)
sp\|B9HF05_POPTR	1	185	185	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43594.1	1	185	185	89.18	185	90	7e-96
Target_name	Start	End	Length	Cov(%)
Os02t0327100-01	1	185	186	99.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold498	Augus-PASA	mRNA	40653	42969	.	+	.	ID=Dca43594.1;Parent=Dca43594
scaffold498	Augus-PASA	exon	40653	40717	.	+	.	ID=Dca43594.1.exon1;Parent=Dca43594.1
scaffold498	Augus-PASA	exon	40802	40912	.	+	.	ID=Dca43594.1.exon2;Parent=Dca43594.1
scaffold498	Augus-PASA	exon	41764	41926	.	+	.	ID=Dca43594.1.exon3;Parent=Dca43594.1
scaffold498	Augus-PASA	exon	42443	42523	.	+	.	ID=Dca43594.1.exon4;Parent=Dca43594.1
scaffold498	Augus-PASA	exon	42832	42969	.	+	.	ID=Dca43594.1.exon5;Parent=Dca43594.1