Carnation DB

Dca43596.1

Annotation

7-exons
f-1
sp|D7SPE0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0023g01770#GO:0030117;GO:0008565;GO:0006886;GO:0016192#1F2P1C
AT3G50860.1 | Symbols: | Clathrin adaptor complex small chain family protein | chr3:18902346-18903959 FORWARD LENGTH=166
Repeat List (scaffold498)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43596.1	1	164	165	81.81	164	83	3e-79
Target_name	Start	End	Length	Cov(%)
sp\|D7SPE0_VITVI	1	164	165	99.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43596.1	1	164	165	76.96	164	78	8e-77
Target_name	Start	End	Length	Cov(%)
AT3G50860.1	1	164	166	98.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold498	Augustus	mRNA	48311	50677	.	-	.	ID=Dca43596.1;Parent=Dca43596
scaffold498	Augustus	exon	48311	48374	.	-	.	ID=Dca43596.1.exon1;Parent=Dca43596.1
scaffold498	Augus-PASA	exon	48508	48599	.	-	.	ID=Dca43596.1.exon2;Parent=Dca43596.1
scaffold498	Augus-PASA	exon	48683	48753	.	-	.	ID=Dca43596.1.exon3;Parent=Dca43596.1
scaffold498	Augus-PASA	exon	48961	49057	.	-	.	ID=Dca43596.1.exon4;Parent=Dca43596.1
scaffold498	Augus-PASA	exon	49662	49723	.	-	.	ID=Dca43596.1.exon5;Parent=Dca43596.1
scaffold498	Augus-PASA	exon	50464	50506	.	-	.	ID=Dca43596.1.exon6;Parent=Dca43596.1
scaffold498	Augus-PASA	exon	50609	50677	.	-	.	ID=Dca43596.1.exon7;Parent=Dca43596.1