Carnation DB

Dca43618.1

Annotation

5-exons
f-1
sp|F6GX56_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0219g00030#GO:0008270#1F0P0C
Os12t0267900-01 Zinc finger, RING/FYVE/PHD-type domain containing protein.
Repeat List (scaffold4984)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43618.1	52	230	232	51.72	179	64	2e-58
Target_name	Start	End	Length	Cov(%)
sp\|F6GX56_VITVI	148	334	338	55.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43618.1	47	232	232	51.72	186	49	2e-49
Target_name	Start	End	Length	Cov(%)
Os12t0267900-01	146	391	392	62.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4984	Augustus	mRNA	17633	18734	.	-	.	ID=Dca43618.1;Parent=Dca43618
scaffold4984	Augustus	exon	17633	18008	.	-	.	ID=Dca43618.1.exon1;Parent=Dca43618.1
scaffold4984	Augustus	exon	18118	18192	.	-	.	ID=Dca43618.1.exon2;Parent=Dca43618.1
scaffold4984	Augustus	exon	18311	18360	.	-	.	ID=Dca43618.1.exon3;Parent=Dca43618.1
scaffold4984	Augustus	exon	18450	18604	.	-	.	ID=Dca43618.1.exon4;Parent=Dca43618.1
scaffold4984	Augustus	exon	18692	18734	.	-	.	ID=Dca43618.1.exon5;Parent=Dca43618.1