Dca4365.1
Annotation
- 2-exons
- f-1
- sp|Q9SJ83_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g04760#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold1162)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4365.1 |
1 |
156 |
206 |
25.24 |
156 |
34 |
4e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SJ83_ARATH |
266 |
405 |
631 |
22.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4365.1 |
3 |
78 |
206 |
14.07 |
76 |
39 |
3e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0643433-00 |
206 |
281 |
644 |
11.8 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1162 |
Augustus |
mRNA |
8546 |
9431 |
. |
- |
. |
ID=Dca4365.1;Parent=Dca4365 |
| scaffold1162 |
Augustus |
exon |
8546 |
8932 |
. |
- |
. |
ID=Dca4365.1.exon1;Parent=Dca4365.1 |
| scaffold1162 |
Augustus |
exon |
9198 |
9431 |
. |
- |
. |
ID=Dca4365.1.exon2;Parent=Dca4365.1 |
