Dca43682.1
Annotation
- 2-exons
- f-1
- sp|B1N668_SOLLC#Copia LTR rider#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#ORFNames=LYC_68t000004, SUNLYC_67t000007#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold4997)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43682.1 |
1 |
302 |
306 |
76.47 |
302 |
68 |
3e-136
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B1N668_SOLLC |
959 |
1304 |
1307 |
26.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43682.1 |
5 |
294 |
306 |
34.64 |
290 |
32 |
9e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1057 |
1382 |
1401 |
23.26 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4997 |
Augustus |
mRNA |
12124 |
13176 |
. |
- |
. |
ID=Dca43682.1;Parent=Dca43682 |
| scaffold4997 |
Augustus |
exon |
12124 |
12443 |
. |
- |
. |
ID=Dca43682.1.exon1;Parent=Dca43682.1 |
| scaffold4997 |
Augustus |
exon |
12576 |
13176 |
. |
- |
. |
ID=Dca43682.1.exon2;Parent=Dca43682.1 |
