Carnation DB

Dca43707.1

Annotation

7-exons
f-1
sp|B9HRG4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_821141#unknown#0F0P0C
Repeat List (scaffold5)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43707.1	22	236	236	65.67	215	72	9e-86
Target_name	Start	End	Length	Cov(%)
sp\|B9HRG4_POPTR	14	231	231	94.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43707.1	27	236	236	66.1	210	72	6e-86
Target_name	Start	End	Length	Cov(%)
AT2G16460.1	15	230	230	93.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5	Augustus	mRNA	143909	146397	.	-	.	ID=Dca43707.1;Parent=Dca43707
scaffold5	Augustus	exon	143909	144028	.	-	.	ID=Dca43707.1.exon1;Parent=Dca43707.1
scaffold5	Augustus	exon	144172	144238	.	-	.	ID=Dca43707.1.exon2;Parent=Dca43707.1
scaffold5	Augustus	exon	144322	144378	.	-	.	ID=Dca43707.1.exon3;Parent=Dca43707.1
scaffold5	Augustus	exon	144500	144576	.	-	.	ID=Dca43707.1.exon4;Parent=Dca43707.1
scaffold5	Augustus	exon	145150	145209	.	-	.	ID=Dca43707.1.exon5;Parent=Dca43707.1
scaffold5	Augustus	exon	145296	145427	.	-	.	ID=Dca43707.1.exon6;Parent=Dca43707.1
scaffold5	Augustus	exon	146200	146397	.	-	.	ID=Dca43707.1.exon7;Parent=Dca43707.1