Carnation DB

Dca43711.1

Annotation

5-exons
f-1
sp|D7U5G9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0038g00690#GO:0005622;GO:0008270#1F0P1C
sp|B9RHD7_RICCO#Salt-tolerance protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1450450#GO:0005622;GO:0008270#1F0P1C
Repeat List (scaffold5)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43711.1	1	209	209	66.02	209	66	4e-76
Target_name	Start	End	Length	Cov(%)
sp\|D7U5G9_VITVI	1	210	210	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43711.1	1	209	209	59.33	209	58	3e-62
Target_name	Start	End	Length	Cov(%)
Os09t0527900-01	1	211	212	99.52

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5	Augus-PASA	mRNA	173113	175881	.	-	.	ID=Dca43711.1;Parent=Dca43711
scaffold5	Augus-PASA	exon	173113	173193	.	-	.	ID=Dca43711.1.exon1;Parent=Dca43711.1
scaffold5	Augus-PASA	exon	173458	173700	.	-	.	ID=Dca43711.1.exon2;Parent=Dca43711.1
scaffold5	Augus-PASA	exon	173806	173921	.	-	.	ID=Dca43711.1.exon3;Parent=Dca43711.1
scaffold5	Augus-PASA	exon	174002	174098	.	-	.	ID=Dca43711.1.exon4;Parent=Dca43711.1
scaffold5	Augus-PASA	exon	175789	175881	.	-	.	ID=Dca43711.1.exon5;Parent=Dca43711.1