Carnation DB

Dca43716.1

Annotation

6-exons
f-1
sp|B9HRF5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_649314#unknown#0F0P0C
sp|B9RHE0_RICCO#NADH dehydrogenase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1450680#unknown#0F0P0C
Repeat List (scaffold5)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43716.1	1	114	558	15.77	114	78	3e-49
Target_name	Start	End	Length	Cov(%)
sp\|B9HRF5_POPTR	1	114	116	98.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43716.1	2	114	558	14.69	113	73	8e-48
Target_name	Start	End	Length	Cov(%)
AT4G34700.1	3	115	117	96.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5	Augus-PASA	mRNA	199234	204529	.	+	.	ID=Dca43716.1;Parent=Dca43716
scaffold5	Augus-PASA	exon	199234	199362	.	+	.	ID=Dca43716.1.exon1;Parent=Dca43716.1
scaffold5	Augus-PASA	exon	199462	199503	.	+	.	ID=Dca43716.1.exon2;Parent=Dca43716.1
scaffold5	Augus-PASA	exon	200428	200509	.	+	.	ID=Dca43716.1.exon3;Parent=Dca43716.1
scaffold5	Augus-PASA	exon	201249	201304	.	+	.	ID=Dca43716.1.exon4;Parent=Dca43716.1
scaffold5	Augustus	exon	201840	201883	.	+	.	ID=Dca43716.1.exon5;Parent=Dca43716.1
scaffold5	Augustus	exon	203206	204529	.	+	.	ID=Dca43716.1.exon6;Parent=Dca43716.1