Carnation DB

Dca43759.1

Annotation

5-exons
f-1
sp|Q43423_DIACA#Cysteine proteinase#Dianthus caryophyllus (Carnation) (Clove pink)#Name=DCCP1#GO:0004197;GO:0006508#1F1P0C
Repeat List (scaffold5)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43759.1	54	469	472	84.32	416	96	0
Target_name	Start	End	Length	Cov(%)
sp\|Q43423_DIACA	6	414	427	95.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43759.1	10	464	472	65.46	455	68	5e-176
Target_name	Start	End	Length	Cov(%)
AT1G47128.1	10	451	462	95.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5	Augus-PASA	mRNA	605469	608421	.	-	.	ID=Dca43759.1;Parent=Dca43759
scaffold5	Augus-PASA	exon	605469	605546	.	-	.	ID=Dca43759.1.exon1;Parent=Dca43759.1
scaffold5	Augus-PASA	exon	605649	606104	.	-	.	ID=Dca43759.1.exon2;Parent=Dca43759.1
scaffold5	Augus-PASA	exon	606220	606360	.	-	.	ID=Dca43759.1.exon3;Parent=Dca43759.1
scaffold5	Augus-PASA	exon	606454	606689	.	-	.	ID=Dca43759.1.exon4;Parent=Dca43759.1
scaffold5	Augus-PASA	exon	607914	608421	.	-	.	ID=Dca43759.1.exon5;Parent=Dca43759.1