Carnation DB

Dca43763.1

Annotation

9-exons
f-1
sp|B9HS29_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_557409#GO:0008270#1F0P0C
Os06t0639100-02 Similar to protein binding / zinc ion binding.
Repeat List (scaffold5)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43763.1	72	1075	1096	70.89	1004	77	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HS29_POPTR	63	1073	1110	91.08

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43763.1	72	1091	1096	68.7	1020	73	0
Target_name	Start	End	Length	Cov(%)
AT4G34100.1	67	1103	1108	93.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5	Augustus	mRNA	634264	639391	.	-	.	ID=Dca43763.1;Parent=Dca43763
scaffold5	Augustus	exon	634264	634716	.	-	.	ID=Dca43763.1.exon1;Parent=Dca43763.1
scaffold5	Augustus	exon	634795	634941	.	-	.	ID=Dca43763.1.exon2;Parent=Dca43763.1
scaffold5	Augustus	exon	635038	635201	.	-	.	ID=Dca43763.1.exon3;Parent=Dca43763.1
scaffold5	Augustus	exon	635293	635453	.	-	.	ID=Dca43763.1.exon4;Parent=Dca43763.1
scaffold5	Augustus	exon	635572	635913	.	-	.	ID=Dca43763.1.exon5;Parent=Dca43763.1
scaffold5	Augustus	exon	636036	636247	.	-	.	ID=Dca43763.1.exon6;Parent=Dca43763.1
scaffold5	Augustus	exon	636331	637098	.	-	.	ID=Dca43763.1.exon7;Parent=Dca43763.1
scaffold5	Augustus	exon	637285	637977	.	-	.	ID=Dca43763.1.exon8;Parent=Dca43763.1
scaffold5	Augustus	exon	639041	639391	.	-	.	ID=Dca43763.1.exon9;Parent=Dca43763.1