Carnation DB

Dca43786.1

Annotation

5-exons
f-1
sp|Q94LA8_ARATH#Polyprotein, putative#Arabidopsis thaliana (Mouse-ear cress)#Name=T18F15.5#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold5)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43786.1	38	396	1091	11.09	359	30	3e-37
Target_name	Start	End	Length	Cov(%)
sp\|Q94LA8_ARATH	3	399	1459	27.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43786.1	380	1061	1091	22.08	682	31	3e-98
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	660	1389	1401	52.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5	Augustus	mRNA	835606	840029	.	-	.	ID=Dca43786.1;Parent=Dca43786
scaffold5	Augustus	exon	835606	836480	.	-	.	ID=Dca43786.1.exon1;Parent=Dca43786.1
scaffold5	Augustus	exon	836598	836953	.	-	.	ID=Dca43786.1.exon2;Parent=Dca43786.1
scaffold5	Augustus	exon	837068	837974	.	-	.	ID=Dca43786.1.exon3;Parent=Dca43786.1
scaffold5	Augustus	exon	838790	839249	.	-	.	ID=Dca43786.1.exon4;Parent=Dca43786.1
scaffold5	Augustus	exon	839352	840029	.	-	.	ID=Dca43786.1.exon5;Parent=Dca43786.1