Carnation DB

Dca43792.1

Annotation

13-exons
f-1
sp|D7TR56_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0028g00300#GO:0005488;GO:0016884#2F0P0C
AT5G09420.1 | Symbols: ATTOC64-V, MTOM64, TOC64-V, OM64, AtmtOM64 | translocon at the outer membrane of chloroplasts 64-V | chr5:2928316-2931750 FORWARD LENGTH=603
Repeat List (scaffold5)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43792.1	14	609	609	66.33	596	68	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TR56_VITVI	16	607	607	97.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43792.1	10	606	609	59.93	597	61	0
Target_name	Start	End	Length	Cov(%)
AT5G09420.1	10	601	603	98.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5	Augus-PASA	mRNA	896662	903116	.	-	.	ID=Dca43792.1;Parent=Dca43792
scaffold5	Augus-PASA	exon	896662	896744	.	-	.	ID=Dca43792.1.exon1;Parent=Dca43792.1
scaffold5	Augus-PASA	exon	896986	897055	.	-	.	ID=Dca43792.1.exon2;Parent=Dca43792.1
scaffold5	Augus-PASA	exon	897825	897876	.	-	.	ID=Dca43792.1.exon3;Parent=Dca43792.1
scaffold5	Augus-PASA	exon	898258	898385	.	-	.	ID=Dca43792.1.exon4;Parent=Dca43792.1
scaffold5	Augus-PASA	exon	898586	898786	.	-	.	ID=Dca43792.1.exon5;Parent=Dca43792.1
scaffold5	Augus-PASA	exon	898876	899010	.	-	.	ID=Dca43792.1.exon6;Parent=Dca43792.1
scaffold5	Augustus	exon	899317	899485	.	-	.	ID=Dca43792.1.exon7;Parent=Dca43792.1
scaffold5	Augustus	exon	900045	900189	.	-	.	ID=Dca43792.1.exon8;Parent=Dca43792.1
scaffold5	Augustus	exon	900365	900544	.	-	.	ID=Dca43792.1.exon9;Parent=Dca43792.1
scaffold5	Augustus	exon	901127	901252	.	-	.	ID=Dca43792.1.exon10;Parent=Dca43792.1
scaffold5	Augustus	exon	901503	901627	.	-	.	ID=Dca43792.1.exon11;Parent=Dca43792.1
scaffold5	Augustus	exon	901978	902130	.	-	.	ID=Dca43792.1.exon12;Parent=Dca43792.1
scaffold5	Augustus	exon	902854	903116	.	-	.	ID=Dca43792.1.exon13;Parent=Dca43792.1