Carnation DB

Dca43793.1

Annotation

10-exons
f-1
sp|B9H730_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1078275#GO:0003824#1F0P0C
sp|B9RJK7_RICCO#Protein phosphatase 2c, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1035670#GO:0004721#1F0P0C
Repeat List (scaffold5)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43793.1	1	277	457	48.14	277	80	2e-129
Target_name	Start	End	Length	Cov(%)
sp\|B9H730_POPTR	1	278	283	98.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43793.1	1	277	457	45.51	277	75	1e-120
Target_name	Start	End	Length	Cov(%)
AT1G34750.1	1	278	282	98.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5	Augustus	mRNA	906301	913396	.	+	.	ID=Dca43793.1;Parent=Dca43793
scaffold5	Augustus	exon	906301	906336	.	+	.	ID=Dca43793.1.exon1;Parent=Dca43793.1
scaffold5	Augus-PASA	exon	907225	907464	.	+	.	ID=Dca43793.1.exon2;Parent=Dca43793.1
scaffold5	Augus-PASA	exon	908057	908333	.	+	.	ID=Dca43793.1.exon3;Parent=Dca43793.1
scaffold5	Augus-PASA	exon	908520	908674	.	+	.	ID=Dca43793.1.exon4;Parent=Dca43793.1
scaffold5	Augustus	exon	908791	908913	.	+	.	ID=Dca43793.1.exon5;Parent=Dca43793.1
scaffold5	Augustus	exon	912220	912312	.	+	.	ID=Dca43793.1.exon6;Parent=Dca43793.1
scaffold5	Augustus	exon	912404	912475	.	+	.	ID=Dca43793.1.exon7;Parent=Dca43793.1
scaffold5	Augustus	exon	912555	912761	.	+	.	ID=Dca43793.1.exon8;Parent=Dca43793.1
scaffold5	Augustus	exon	913148	913225	.	+	.	ID=Dca43793.1.exon9;Parent=Dca43793.1
scaffold5	Augustus	exon	913304	913396	.	+	.	ID=Dca43793.1.exon10;Parent=Dca43793.1