Carnation DB

Dca43797.1

Annotation

8-exons
f-1
sp|B9GZT4_POPTR#Heavy metal ATPase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_415119#GO:0016021;GO:0005524;GO:0043682;GO:0046872;GO:0006754#3F1P1C
Repeat List (scaffold5)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43797.1	96	885	922	66.16	790	77	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GZT4_POPTR	70	863	865	91.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43797.1	98	883	922	61.49	786	72	0
Target_name	Start	End	Length	Cov(%)
AT4G33520.2	140	923	949	82.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5	Augustus	mRNA	938042	943998	.	-	.	ID=Dca43797.1;Parent=Dca43797
scaffold5	Augustus	exon	938042	939580	.	-	.	ID=Dca43797.1.exon1;Parent=Dca43797.1
scaffold5	Augustus	exon	939680	939778	.	-	.	ID=Dca43797.1.exon2;Parent=Dca43797.1
scaffold5	Augustus	exon	940096	940326	.	-	.	ID=Dca43797.1.exon3;Parent=Dca43797.1
scaffold5	Augustus	exon	940791	941068	.	-	.	ID=Dca43797.1.exon4;Parent=Dca43797.1
scaffold5	Augustus	exon	941178	941252	.	-	.	ID=Dca43797.1.exon5;Parent=Dca43797.1
scaffold5	Augustus	exon	942704	942857	.	-	.	ID=Dca43797.1.exon6;Parent=Dca43797.1
scaffold5	Augustus	exon	943497	943550	.	-	.	ID=Dca43797.1.exon7;Parent=Dca43797.1
scaffold5	Augustus	exon	943660	943998	.	-	.	ID=Dca43797.1.exon8;Parent=Dca43797.1