Carnation DB

Dca43809.1

Annotation

8-exons
f-1
sp|A5BQP3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0038g01820#GO:0005783#0F0P1C
sp|B9STC6_RICCO#Translocon-associated protein, alpha subunit, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0660600#GO:0005783#0F0P1C
Repeat List (scaffold5)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43809.1	1	248	257	63.42	248	66	5e-88
Target_name	Start	End	Length	Cov(%)
sp\|A5BQP3_VITVI	1	244	253	96.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43809.1	16	248	257	54.86	233	61	2e-79
Target_name	Start	End	Length	Cov(%)
Os06t0715500-03	21	250	258	89.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5	Augus-PASA	mRNA	1031206	1033988	.	+	.	ID=Dca43809.1;Parent=Dca43809
scaffold5	Augus-PASA	exon	1031206	1031263	.	+	.	ID=Dca43809.1.exon1;Parent=Dca43809.1
scaffold5	Augus-PASA	exon	1032214	1032381	.	+	.	ID=Dca43809.1.exon2;Parent=Dca43809.1
scaffold5	Augus-PASA	exon	1032525	1032575	.	+	.	ID=Dca43809.1.exon3;Parent=Dca43809.1
scaffold5	Augus-PASA	exon	1032715	1032803	.	+	.	ID=Dca43809.1.exon4;Parent=Dca43809.1
scaffold5	Augus-PASA	exon	1033199	1033276	.	+	.	ID=Dca43809.1.exon5;Parent=Dca43809.1
scaffold5	Augus-PASA	exon	1033404	1033607	.	+	.	ID=Dca43809.1.exon6;Parent=Dca43809.1
scaffold5	Augus-PASA	exon	1033738	1033812	.	+	.	ID=Dca43809.1.exon7;Parent=Dca43809.1
scaffold5	Augus-PASA	exon	1033938	1033988	.	+	.	ID=Dca43809.1.exon8;Parent=Dca43809.1