Dca43816.1
Annotation
- 2-exons
- f-1
- sp|B9SD31_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1068300#unknown#0F0P0C
- AT5G51960.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Complex 1 LYR protein (InterPro:IPR008011); Has 45 Blast hits to 45 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:21110716-21111116 FORWARD LENGTH=103
- Repeat List (scaffold5)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43816.1 |
1 |
109 |
109 |
77.98 |
109 |
78 |
1e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9SD31_RICCO |
1 |
110 |
110 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43816.1 |
1 |
109 |
109 |
63.3 |
109 |
64 |
2e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G51960.1 |
1 |
103 |
103 |
100 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5 |
Augustus |
mRNA |
1108020 |
1108696 |
. |
+ |
. |
ID=Dca43816.1;Parent=Dca43816 |
| scaffold5 |
Augustus |
exon |
1108020 |
1108235 |
. |
+ |
. |
ID=Dca43816.1.exon1;Parent=Dca43816.1 |
| scaffold5 |
Augus-PASA |
exon |
1108583 |
1108696 |
. |
+ |
. |
ID=Dca43816.1.exon2;Parent=Dca43816.1 |
