Carnation DB

Dca43824.1

Annotation

5-exons
f-1
sp|B9RCG6_RICCO#Polygalacturonase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1688080#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
Repeat List (scaffold50)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43824.1	1	433	433	77.13	433	78	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RCG6_RICCO	46	478	480	90.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43824.1	3	430	433	74.13	428	74	0
Target_name	Start	End	Length	Cov(%)
AT3G61490.1	40	473	476	91.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold50	Augustus	mRNA	34618	36799	.	+	.	ID=Dca43824.1;Parent=Dca43824
scaffold50	Augustus	exon	34618	34848	.	+	.	ID=Dca43824.1.exon1;Parent=Dca43824.1
scaffold50	Augustus	exon	35412	35532	.	+	.	ID=Dca43824.1.exon2;Parent=Dca43824.1
scaffold50	Augustus	exon	35629	35803	.	+	.	ID=Dca43824.1.exon3;Parent=Dca43824.1
scaffold50	Augustus	exon	35909	35979	.	+	.	ID=Dca43824.1.exon4;Parent=Dca43824.1
scaffold50	Augustus	exon	36096	36799	.	+	.	ID=Dca43824.1.exon5;Parent=Dca43824.1