Dca43836.1
Annotation
- 4-exons
- f-1
- sp|B9N988_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_586570#unknown#0F0P0C
- sp|Q0JKQ7_ORYSJ#Os01g0656900 protein#Oryza sativa subsp japonica (Rice)#Name=Os01g0656900#unknown#0F0P0C
- Repeat List (scaffold50)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43836.1 |
324 |
429 |
429 |
11.42 |
106 |
43 |
2e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N988_POPTR |
460 |
574 |
580 |
19.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43836.1 |
320 |
427 |
429 |
10.95 |
108 |
41 |
2e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0656900-01 |
661 |
776 |
778 |
14.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold50 |
Augustus |
mRNA |
128285 |
130485 |
. |
- |
. |
ID=Dca43836.1;Parent=Dca43836 |
| scaffold50 |
Augustus |
exon |
128285 |
128468 |
. |
- |
. |
ID=Dca43836.1.exon1;Parent=Dca43836.1 |
| scaffold50 |
Augustus |
exon |
128783 |
129230 |
. |
- |
. |
ID=Dca43836.1.exon2;Parent=Dca43836.1 |
| scaffold50 |
Augustus |
exon |
129337 |
129465 |
. |
- |
. |
ID=Dca43836.1.exon3;Parent=Dca43836.1 |
| scaffold50 |
Augustus |
exon |
129957 |
130485 |
. |
- |
. |
ID=Dca43836.1.exon4;Parent=Dca43836.1 |
