Carnation DB

Dca4384.1

Annotation

5-exons
f-1
sp|B9MU42_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_739824#GO:0003676;GO:0000166#2F0P0C
AT5G46840.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:19005651-19007609 FORWARD LENGTH=501
Repeat List (scaffold1163)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4384.1	17	494	496	53.83	478	53	3e-118
Target_name	Start	End	Length	Cov(%)
sp\|B9MU42_POPTR	24	485	487	94.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4384.1	3	494	496	51.61	492	49	7e-94
Target_name	Start	End	Length	Cov(%)
AT5G46840.1	4	500	501	99.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1163	Augustus	mRNA	108460	111530	.	+	.	ID=Dca4384.1;Parent=Dca4384
scaffold1163	Augustus	exon	108460	109103	.	+	.	ID=Dca4384.1.exon1;Parent=Dca4384.1
scaffold1163	Augustus	exon	110398	110467	.	+	.	ID=Dca4384.1.exon2;Parent=Dca4384.1
scaffold1163	Augustus	exon	110569	110700	.	+	.	ID=Dca4384.1.exon3;Parent=Dca4384.1
scaffold1163	Augustus	exon	110804	110932	.	+	.	ID=Dca4384.1.exon4;Parent=Dca4384.1
scaffold1163	Augustus	exon	111015	111530	.	+	.	ID=Dca4384.1.exon5;Parent=Dca4384.1