Dca43846.1
Annotation
- 3-exons
- f-1
- sp|D7TVH9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g01680#unknown#0F0P0C
- sp|B9GXK0_POPTR#F-box family protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_554506#unknown#0F0P0C
- Repeat List (scaffold50)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43846.1 |
2 |
298 |
298 |
63.75 |
297 |
62 |
3e-100
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7TVH9_VITVI |
28 |
325 |
325 |
91.69 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43846.1 |
90 |
297 |
298 |
48.65 |
208 |
70 |
2e-85
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G10925.1 |
27 |
231 |
231 |
88.74 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold50 |
Augustus |
mRNA |
208342 |
211850 |
. |
- |
. |
ID=Dca43846.1;Parent=Dca43846 |
| scaffold50 |
Augustus |
exon |
208342 |
208603 |
. |
- |
. |
ID=Dca43846.1.exon1;Parent=Dca43846.1 |
| scaffold50 |
Augustus |
exon |
209283 |
209479 |
. |
- |
. |
ID=Dca43846.1.exon2;Parent=Dca43846.1 |
| scaffold50 |
Augustus |
exon |
211413 |
211850 |
. |
- |
. |
ID=Dca43846.1.exon3;Parent=Dca43846.1 |
