Dca43853.1
Annotation
- 2-exons
- f-1
- sp|B9GXI1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_757629#GO:0008270#1F0P0C
- AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:21529022-21533008 FORWARD LENGTH=382
- Repeat List (scaffold50)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43853.1 |
44 |
220 |
230 |
40.86 |
177 |
53 |
6e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GXI1_POPTR |
186 |
361 |
385 |
45.71 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43853.1 |
18 |
224 |
230 |
40.43 |
207 |
45 |
2e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G53110.1 |
173 |
379 |
382 |
54.18 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold50 |
Augustus |
mRNA |
249436 |
251794 |
. |
+ |
. |
ID=Dca43853.1;Parent=Dca43853 |
| scaffold50 |
Augustus |
exon |
249436 |
249691 |
. |
+ |
. |
ID=Dca43853.1.exon1;Parent=Dca43853.1 |
| scaffold50 |
Augustus |
exon |
251358 |
251794 |
. |
+ |
. |
ID=Dca43853.1.exon2;Parent=Dca43853.1 |
