Carnation DB

Dca43873.1

Annotation

16-exons
f-1
sp|D7TBJ4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g03460#GO:0005524;GO:0004674#2F0P0C
AT4G28880.1 | Symbols: ckl3 | casein kinase I-like 3 | chr4:14251351-14254048 FORWARD LENGTH=415
Repeat List (scaffold50)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43873.1	1	426	458	72.92	426	78	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TBJ4_VITVI	1	433	433	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43873.1	1	418	458	65.5	418	72	3e-180
Target_name	Start	End	Length	Cov(%)
AT4G28880.1	1	413	415	99.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold50	Augus-PASA	mRNA	394367	399484	.	+	.	ID=Dca43873.1;Parent=Dca43873
scaffold50	Augus-PASA	exon	394367	394442	.	+	.	ID=Dca43873.1.exon1;Parent=Dca43873.1
scaffold50	Augus-PASA	exon	394542	394582	.	+	.	ID=Dca43873.1.exon2;Parent=Dca43873.1
scaffold50	Augus-PASA	exon	394988	395057	.	+	.	ID=Dca43873.1.exon3;Parent=Dca43873.1
scaffold50	Augus-PASA	exon	395180	395328	.	+	.	ID=Dca43873.1.exon4;Parent=Dca43873.1
scaffold50	Augus-PASA	exon	395507	395602	.	+	.	ID=Dca43873.1.exon5;Parent=Dca43873.1
scaffold50	Augus-PASA	exon	395682	395752	.	+	.	ID=Dca43873.1.exon6;Parent=Dca43873.1
scaffold50	Augus-PASA	exon	395907	395968	.	+	.	ID=Dca43873.1.exon7;Parent=Dca43873.1
scaffold50	Augus-PASA	exon	396050	396113	.	+	.	ID=Dca43873.1.exon8;Parent=Dca43873.1
scaffold50	Augus-PASA	exon	396227	396311	.	+	.	ID=Dca43873.1.exon9;Parent=Dca43873.1
scaffold50	Augus-PASA	exon	396442	396568	.	+	.	ID=Dca43873.1.exon10;Parent=Dca43873.1
scaffold50	Augus-PASA	exon	396864	396946	.	+	.	ID=Dca43873.1.exon11;Parent=Dca43873.1
scaffold50	Augus-PASA	exon	397146	397203	.	+	.	ID=Dca43873.1.exon12;Parent=Dca43873.1
scaffold50	Augus-PASA	exon	397545	397681	.	+	.	ID=Dca43873.1.exon13;Parent=Dca43873.1
scaffold50	Augustus	exon	397812	397969	.	+	.	ID=Dca43873.1.exon14;Parent=Dca43873.1
scaffold50	Augustus	exon	399303	399350	.	+	.	ID=Dca43873.1.exon15;Parent=Dca43873.1
scaffold50	Augustus	exon	399433	399484	.	+	.	ID=Dca43873.1.exon16;Parent=Dca43873.1
scaffold50	Augus-PASA	mRNA	394367	399484	.	+	.	ID=Dca43873.2;Parent=Dca43873
scaffold50	Augus-PASA	exon	394367	394442	.	+	.	ID=Dca43873.2.exon1;Parent=Dca43873.2
scaffold50	Augus-PASA	exon	394542	394582	.	+	.	ID=Dca43873.2.exon2;Parent=Dca43873.2
scaffold50	Augus-PASA	exon	394988	395057	.	+	.	ID=Dca43873.2.exon3;Parent=Dca43873.2
scaffold50	Augus-PASA	exon	395180	395328	.	+	.	ID=Dca43873.2.exon4;Parent=Dca43873.2
scaffold50	Augus-PASA	exon	395507	395602	.	+	.	ID=Dca43873.2.exon5;Parent=Dca43873.2
scaffold50	Augus-PASA	exon	395682	395752	.	+	.	ID=Dca43873.2.exon6;Parent=Dca43873.2
scaffold50	Augus-PASA	exon	395907	395968	.	+	.	ID=Dca43873.2.exon7;Parent=Dca43873.2
scaffold50	Augus-PASA	exon	396050	396113	.	+	.	ID=Dca43873.2.exon8;Parent=Dca43873.2
scaffold50	Augus-PASA	exon	396227	396311	.	+	.	ID=Dca43873.2.exon9;Parent=Dca43873.2
scaffold50	Augus-PASA	exon	396442	396568	.	+	.	ID=Dca43873.2.exon10;Parent=Dca43873.2
scaffold50	Augus-PASA	exon	396864	396946	.	+	.	ID=Dca43873.2.exon11;Parent=Dca43873.2
scaffold50	Augus-PASA	exon	397146	397203	.	+	.	ID=Dca43873.2.exon12;Parent=Dca43873.2
scaffold50	Augus-PASA	exon	397581	397681	.	+	.	ID=Dca43873.2.exon13;Parent=Dca43873.2
scaffold50	Augustus	exon	397812	397969	.	+	.	ID=Dca43873.2.exon14;Parent=Dca43873.2
scaffold50	Augustus	exon	399303	399350	.	+	.	ID=Dca43873.2.exon15;Parent=Dca43873.2
scaffold50	Augustus	exon	399433	399484	.	+	.	ID=Dca43873.2.exon16;Parent=Dca43873.2