Carnation DB

Dca43918.1

Annotation

6-exons
f-1
sp|F6HPS8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0156g00170#GO:0019008;GO:0051539;GO:0003824;GO:0046872;GO:0006777#3F1P1C
sp|B9REL9_RICCO#Molybdopterin cofactor synthesis protein A, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1775070#GO:0019008;GO:0051539;GO:0003824;GO:0046872;GO:0006777#3F1P1C
Repeat List (scaffold5005)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43918.1	18	395	395	71.89	378	76	1e-169
Target_name	Start	End	Length	Cov(%)
sp\|F6HPS8_VITVI	125	500	500	75.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43918.1	48	395	395	69.87	348	80	1e-167
Target_name	Start	End	Length	Cov(%)
AT2G31955.1	43	390	390	89.23

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5005	Augustus	mRNA	3198	5705	.	+	.	ID=Dca43918.1;Parent=Dca43918
scaffold5005	Augustus	exon	3198	3260	.	+	.	ID=Dca43918.1.exon1;Parent=Dca43918.1
scaffold5005	Augustus	exon	3922	4533	.	+	.	ID=Dca43918.1.exon2;Parent=Dca43918.1
scaffold5005	Augustus	exon	4630	4797	.	+	.	ID=Dca43918.1.exon3;Parent=Dca43918.1
scaffold5005	Augustus	exon	5032	5223	.	+	.	ID=Dca43918.1.exon4;Parent=Dca43918.1
scaffold5005	Augustus	exon	5430	5498	.	+	.	ID=Dca43918.1.exon5;Parent=Dca43918.1
scaffold5005	Augustus	exon	5622	5705	.	+	.	ID=Dca43918.1.exon6;Parent=Dca43918.1