Dca43927.1
Annotation
- 4-exons
- f-1
- sp|B9R9T2_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1500460#unknown#0F0P0C
- AT5G51400.1 | Symbols: | PLAC8 family protein | chr5:20878784-20880036 REVERSE LENGTH=241
- Repeat List (scaffold5008)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43927.1 |
1 |
230 |
247 |
66.8 |
230 |
72 |
3e-98
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9R9T2_RICCO |
2 |
230 |
236 |
97.03 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43927.1 |
1 |
245 |
247 |
59.91 |
245 |
60 |
6e-83
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G51400.1 |
2 |
241 |
241 |
99.58 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5008 |
Augustus |
mRNA |
5479 |
8724 |
. |
- |
. |
ID=Dca43927.1;Parent=Dca43927 |
| scaffold5008 |
Augustus |
exon |
5479 |
5727 |
. |
- |
. |
ID=Dca43927.1.exon1;Parent=Dca43927.1 |
| scaffold5008 |
Augustus |
exon |
6183 |
6448 |
. |
- |
. |
ID=Dca43927.1.exon2;Parent=Dca43927.1 |
| scaffold5008 |
Augustus |
exon |
7193 |
7307 |
. |
- |
. |
ID=Dca43927.1.exon3;Parent=Dca43927.1 |
| scaffold5008 |
Augustus |
exon |
8611 |
8724 |
. |
- |
. |
ID=Dca43927.1.exon4;Parent=Dca43927.1 |
