Dca43936.1
Annotation
- 3-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold501)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43936.1 |
143 |
239 |
239 |
29.28 |
97 |
73 |
3e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
878 |
974 |
1553 |
6.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43936.1 |
143 |
237 |
239 |
13.38 |
95 |
34 |
1e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
871 |
965 |
1539 |
6.17 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold501 |
Augustus |
mRNA |
42894 |
45586 |
. |
+ |
. |
ID=Dca43936.1;Parent=Dca43936 |
| scaffold501 |
Augustus |
exon |
42894 |
43160 |
. |
+ |
. |
ID=Dca43936.1.exon1;Parent=Dca43936.1 |
| scaffold501 |
Augustus |
exon |
43740 |
43869 |
. |
+ |
. |
ID=Dca43936.1.exon2;Parent=Dca43936.1 |
| scaffold501 |
Augustus |
exon |
45264 |
45586 |
. |
+ |
. |
ID=Dca43936.1.exon3;Parent=Dca43936.1 |
