Carnation DB

Dca43975.1

Annotation

5-exons
f-1
sp|Q2QDF7_GOSHI#24-sterol C-methyltransferase#Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)#Name=SMT1#GO:0008168;GO:0006694#1F1P0C
Repeat List (scaffold5019)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43975.1	44	166	166	48.79	123	64	1e-40
Target_name	Start	End	Length	Cov(%)
sp\|Q2QDF7_GOSHI	186	313	346	36.99

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43975.1	44	166	166	46.98	123	61	6e-38
Target_name	Start	End	Length	Cov(%)
AT5G13710.1	180	307	336	38.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5019	Augustus	mRNA	8113	10533	.	-	.	ID=Dca43975.1;Parent=Dca43975
scaffold5019	Augustus	exon	8113	8175	.	-	.	ID=Dca43975.1.exon1;Parent=Dca43975.1
scaffold5019	Augustus	exon	8320	8490	.	-	.	ID=Dca43975.1.exon2;Parent=Dca43975.1
scaffold5019	Augustus	exon	8677	8817	.	-	.	ID=Dca43975.1.exon3;Parent=Dca43975.1
scaffold5019	Augustus	exon	9197	9259	.	-	.	ID=Dca43975.1.exon4;Parent=Dca43975.1
scaffold5019	Augustus	exon	10471	10533	.	-	.	ID=Dca43975.1.exon5;Parent=Dca43975.1