Carnation DB

Dca44000.1

Annotation

9-exons
f-1
sp|B9GIH2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_752026#GO:0005509;GO:0004435;GO:0004871;GO:0035556;GO:0006629#3F2P0C
sp|B9T5Y1_RICCO#1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0339640#GO:0005509;GO:0004435;GO:0004871;GO:0035556;GO:0006629#3F2P0C
Repeat List (scaffold5021)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44000.1	18	572	576	57.11	555	58	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GIH2_POPTR	2	572	573	99.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44000.1	18	573	576	53.12	556	53	1e-168
Target_name	Start	End	Length	Cov(%)
AT3G08510.1	2	581	581	99.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5021	Augustus	mRNA	16257	18973	.	+	.	ID=Dca44000.1;Parent=Dca44000
scaffold5021	Augustus	exon	16257	16598	.	+	.	ID=Dca44000.1.exon1;Parent=Dca44000.1
scaffold5021	Augustus	exon	16707	16900	.	+	.	ID=Dca44000.1.exon2;Parent=Dca44000.1
scaffold5021	Augustus	exon	17035	17143	.	+	.	ID=Dca44000.1.exon3;Parent=Dca44000.1
scaffold5021	Augustus	exon	17381	17617	.	+	.	ID=Dca44000.1.exon4;Parent=Dca44000.1
scaffold5021	Augustus	exon	17709	17908	.	+	.	ID=Dca44000.1.exon5;Parent=Dca44000.1
scaffold5021	Augustus	exon	18032	18149	.	+	.	ID=Dca44000.1.exon6;Parent=Dca44000.1
scaffold5021	Augustus	exon	18251	18391	.	+	.	ID=Dca44000.1.exon7;Parent=Dca44000.1
scaffold5021	Augustus	exon	18491	18577	.	+	.	ID=Dca44000.1.exon8;Parent=Dca44000.1
scaffold5021	Augustus	exon	18671	18973	.	+	.	ID=Dca44000.1.exon9;Parent=Dca44000.1