Carnation DB

Dca44101.1

Annotation

5-exons
f-1
sp|Q336W4_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os10g39530#GO:0003676;GO:0015074#1F1P0C
Repeat List (scaffold5043)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

No data

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44101.1	288	516	553	14.28	229	30	3e-25
Target_name	Start	End	Length	Cov(%)
Os02t0671800-01	265	525	573	45.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5043	Augustus	mRNA	3656	6419	.	-	.	ID=Dca44101.1;Parent=Dca44101
scaffold5043	Augustus	exon	3656	4270	.	-	.	ID=Dca44101.1.exon1;Parent=Dca44101.1
scaffold5043	Augustus	exon	4376	4723	.	-	.	ID=Dca44101.1.exon2;Parent=Dca44101.1
scaffold5043	Augustus	exon	4937	5075	.	-	.	ID=Dca44101.1.exon3;Parent=Dca44101.1
scaffold5043	Augustus	exon	5158	5669	.	-	.	ID=Dca44101.1.exon4;Parent=Dca44101.1
scaffold5043	Augustus	exon	6372	6419	.	-	.	ID=Dca44101.1.exon5;Parent=Dca44101.1