Dca44138.1
Annotation
- 3-exons
- f-2
- sp|B9RER1_RICCO#tRNA pseudouridine synthase d, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1427850#GO:0009982;GO:0003723;GO:0001522#2F1P0C
- Repeat List (scaffold50523)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44138.1 |
1 |
79 |
98 |
46.93 |
79 |
58 |
2e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RER1_RICCO |
468 |
547 |
753 |
10.62 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44138.1 |
1 |
83 |
98 |
35.71 |
83 |
43 |
9e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G04820.1 |
446 |
528 |
715 |
11.6 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold50523 |
Augustus |
mRNA |
1 |
468 |
. |
+ |
. |
ID=Dca44138.1;Parent=Dca44138 |
| scaffold50523 |
Augustus |
exon |
1 |
62 |
. |
+ |
. |
ID=Dca44138.1.exon1;Parent=Dca44138.1 |
| scaffold50523 |
Augustus |
exon |
163 |
338 |
. |
+ |
. |
ID=Dca44138.1.exon2;Parent=Dca44138.1 |
| scaffold50523 |
Augustus |
exon |
409 |
468 |
. |
+ |
. |
ID=Dca44138.1.exon3;Parent=Dca44138.1 |
