Carnation DB

Dca44162.1

Annotation

13-exons
f-1
sp|B9II71_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_576348#GO:0016021;GO:0016760;GO:0008270;GO:0007047;GO:0030244#2F2P1C
Os07t0208500-01 Similar to Cellulose synthase-4.
Repeat List (scaffold506)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44162.1	1	85	99	29.29	85	35	3e-11
Target_name	Start	End	Length	Cov(%)
sp\|A9P873_POPTR	1	85	135	62.96

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44162.1	3	1053	1053	82.33	1051	82	0
Target_name	Start	End	Length	Cov(%)
AT5G05170.1	4	1065	1065	99.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold506	Augus-PASA	mRNA	17912	23201	.	+	.	ID=Dca44162.1;Parent=Dca44162
scaffold506	Augus-PASA	exon	17912	17935	.	+	.	ID=Dca44162.1.exon1;Parent=Dca44162.1
scaffold506	Augustus	exon	18154	18549	.	+	.	ID=Dca44162.1.exon2;Parent=Dca44162.1
scaffold506	Augustus	exon	18643	18709	.	+	.	ID=Dca44162.1.exon3;Parent=Dca44162.1
scaffold506	Augustus	exon	18798	18990	.	+	.	ID=Dca44162.1.exon4;Parent=Dca44162.1
scaffold506	Augustus	exon	19197	19463	.	+	.	ID=Dca44162.1.exon5;Parent=Dca44162.1
scaffold506	Augustus	exon	19544	19889	.	+	.	ID=Dca44162.1.exon6;Parent=Dca44162.1
scaffold506	Augustus	exon	19989	20126	.	+	.	ID=Dca44162.1.exon7;Parent=Dca44162.1
scaffold506	Augustus	exon	20739	20864	.	+	.	ID=Dca44162.1.exon8;Parent=Dca44162.1
scaffold506	Augustus	exon	20954	21166	.	+	.	ID=Dca44162.1.exon9;Parent=Dca44162.1
scaffold506	Augustus	exon	21276	21528	.	+	.	ID=Dca44162.1.exon10;Parent=Dca44162.1
scaffold506	Augus-PASA	exon	21687	21889	.	+	.	ID=Dca44162.1.exon11;Parent=Dca44162.1
scaffold506	Augus-PASA	exon	22175	22525	.	+	.	ID=Dca44162.1.exon12;Parent=Dca44162.1
scaffold506	Augus-PASA	exon	22617	23201	.	+	.	ID=Dca44162.1.exon13;Parent=Dca44162.1