Dca44228.1
Annotation
- 4-exons
- f-1
- sp|C5WUE0_SORBI#Putative uncharacterized protein Sb01g016420#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb01g016420#unknown#0F0P0C
- AT4G05160.1 | Symbols: | AMP-dependent synthetase and ligase family protein | chr4:2664451-2666547 FORWARD LENGTH=544
- Repeat List (scaffold5072)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44228.1 |
31 |
124 |
126 |
53.96 |
94 |
73 |
1e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|C5WUE0_SORBI |
468 |
561 |
564 |
16.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44228.1 |
31 |
126 |
126 |
49.2 |
96 |
65 |
3e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G05160.1 |
449 |
544 |
544 |
17.64 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5072 |
Augustus |
mRNA |
19062 |
21499 |
. |
- |
. |
ID=Dca44228.1;Parent=Dca44228 |
| scaffold5072 |
Augustus |
exon |
19062 |
19175 |
. |
- |
. |
ID=Dca44228.1.exon1;Parent=Dca44228.1 |
| scaffold5072 |
Augustus |
exon |
20734 |
20836 |
. |
- |
. |
ID=Dca44228.1.exon2;Parent=Dca44228.1 |
| scaffold5072 |
Augustus |
exon |
20956 |
21023 |
. |
- |
. |
ID=Dca44228.1.exon3;Parent=Dca44228.1 |
| scaffold5072 |
Augustus |
exon |
21404 |
21499 |
. |
- |
. |
ID=Dca44228.1.exon4;Parent=Dca44228.1 |
