Carnation DB

Dca44231.1

Annotation

22-exons
f-1
sp|B9HU80_POPTR#Aminophospholipid ATPase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_230718#GO:0016021;GO:0005524;GO:0015662;GO:0000287;GO:0004012;GO:0006812#4F1P1C
Repeat List (scaffold5073)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44231.1	838	885	885	4.18	48	78	1e-14
Target_name	Start	End	Length	Cov(%)
sp\|B9HU80_POPTR	1153	1199	1199	3.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44231.1	838	885	885	4.06	48	75	7e-16
Target_name	Start	End	Length	Cov(%)
AT1G59820.1	1167	1213	1213	3.87

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5073	Augustus	mRNA	8019	23914	.	-	.	ID=Dca44231.1;Parent=Dca44231
scaffold5073	Augustus	exon	8019	8166	.	-	.	ID=Dca44231.1.exon1;Parent=Dca44231.1
scaffold5073	Augustus	exon	10084	10214	.	-	.	ID=Dca44231.1.exon2;Parent=Dca44231.1
scaffold5073	Augustus	exon	10312	10533	.	-	.	ID=Dca44231.1.exon3;Parent=Dca44231.1
scaffold5073	Augustus	exon	11359	11562	.	-	.	ID=Dca44231.1.exon4;Parent=Dca44231.1
scaffold5073	Augustus	exon	11686	11765	.	-	.	ID=Dca44231.1.exon5;Parent=Dca44231.1
scaffold5073	Augustus	exon	11875	12040	.	-	.	ID=Dca44231.1.exon6;Parent=Dca44231.1
scaffold5073	Augustus	exon	12805	13017	.	-	.	ID=Dca44231.1.exon7;Parent=Dca44231.1
scaffold5073	Augustus	exon	13107	13170	.	-	.	ID=Dca44231.1.exon8;Parent=Dca44231.1
scaffold5073	Augustus	exon	13265	13366	.	-	.	ID=Dca44231.1.exon9;Parent=Dca44231.1
scaffold5073	Augustus	exon	13580	13722	.	-	.	ID=Dca44231.1.exon10;Parent=Dca44231.1
scaffold5073	Augustus	exon	14563	14667	.	-	.	ID=Dca44231.1.exon11;Parent=Dca44231.1
scaffold5073	Augustus	exon	14748	14897	.	-	.	ID=Dca44231.1.exon12;Parent=Dca44231.1
scaffold5073	Augustus	exon	15469	15585	.	-	.	ID=Dca44231.1.exon13;Parent=Dca44231.1
scaffold5073	Augustus	exon	15672	15749	.	-	.	ID=Dca44231.1.exon14;Parent=Dca44231.1
scaffold5073	Augustus	exon	15875	15962	.	-	.	ID=Dca44231.1.exon15;Parent=Dca44231.1
scaffold5073	Augustus	exon	16043	16164	.	-	.	ID=Dca44231.1.exon16;Parent=Dca44231.1
scaffold5073	Augustus	exon	17972	18049	.	-	.	ID=Dca44231.1.exon17;Parent=Dca44231.1
scaffold5073	Augustus	exon	19069	19161	.	-	.	ID=Dca44231.1.exon18;Parent=Dca44231.1
scaffold5073	Augustus	exon	19323	19404	.	-	.	ID=Dca44231.1.exon19;Parent=Dca44231.1
scaffold5073	Augustus	exon	20032	20093	.	-	.	ID=Dca44231.1.exon20;Parent=Dca44231.1
scaffold5073	Augustus	exon	20206	20271	.	-	.	ID=Dca44231.1.exon21;Parent=Dca44231.1
scaffold5073	Augustus	exon	23771	23914	.	-	.	ID=Dca44231.1.exon22;Parent=Dca44231.1