Carnation DB

Dca44236.1

Annotation

23-exons
f-1
sp|Q9LEZ5_ARATH#Putative uncharacterized protein T22D6_50#Arabidopsis thaliana (Mouse-ear cress)#Name=T22D6_50#GO:0005524;GO:0008026;GO:0003676#3F0P0C
AT5G08110.1 | Symbols: | nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases | chr5:2594854-2600114 REVERSE LENGTH=1141
Repeat List (scaffold5074)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44236.1	3	1084	1106	48.91	1082	48	0
Target_name	Start	End	Length	Cov(%)
sp\|Q9LEZ5_ARATH	2	1051	1058	99.24

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44236.1	3	577	1106	19.34	575	37	7e-78
Target_name	Start	End	Length	Cov(%)
AT5G08110.1	2	496	1141	43.38

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5074	Augus-PASA	mRNA	9746	19265	.	-	.	ID=Dca44236.1;Parent=Dca44236
scaffold5074	Augus-PASA	exon	9746	9814	.	-	.	ID=Dca44236.1.exon1;Parent=Dca44236.1
scaffold5074	Augus-PASA	exon	9906	9968	.	-	.	ID=Dca44236.1.exon2;Parent=Dca44236.1
scaffold5074	Augus-PASA	exon	10055	10150	.	-	.	ID=Dca44236.1.exon3;Parent=Dca44236.1
scaffold5074	Augus-PASA	exon	10445	10568	.	-	.	ID=Dca44236.1.exon4;Parent=Dca44236.1
scaffold5074	Augustus	exon	10681	10793	.	-	.	ID=Dca44236.1.exon5;Parent=Dca44236.1
scaffold5074	Augustus	exon	10885	11052	.	-	.	ID=Dca44236.1.exon6;Parent=Dca44236.1
scaffold5074	Augustus	exon	11279	11434	.	-	.	ID=Dca44236.1.exon7;Parent=Dca44236.1
scaffold5074	Augustus	exon	11873	12052	.	-	.	ID=Dca44236.1.exon8;Parent=Dca44236.1
scaffold5074	Augustus	exon	12130	12289	.	-	.	ID=Dca44236.1.exon9;Parent=Dca44236.1
scaffold5074	Augustus	exon	12367	12503	.	-	.	ID=Dca44236.1.exon10;Parent=Dca44236.1
scaffold5074	Augustus	exon	12672	12747	.	-	.	ID=Dca44236.1.exon11;Parent=Dca44236.1
scaffold5074	Augustus	exon	12826	12933	.	-	.	ID=Dca44236.1.exon12;Parent=Dca44236.1
scaffold5074	Augustus	exon	13034	13083	.	-	.	ID=Dca44236.1.exon13;Parent=Dca44236.1
scaffold5074	Augustus	exon	13172	13273	.	-	.	ID=Dca44236.1.exon14;Parent=Dca44236.1
scaffold5074	Augustus	exon	14235	14363	.	-	.	ID=Dca44236.1.exon15;Parent=Dca44236.1
scaffold5074	Augustus	exon	14602	14751	.	-	.	ID=Dca44236.1.exon16;Parent=Dca44236.1
scaffold5074	Augustus	exon	14834	14956	.	-	.	ID=Dca44236.1.exon17;Parent=Dca44236.1
scaffold5074	Augustus	exon	15296	15364	.	-	.	ID=Dca44236.1.exon18;Parent=Dca44236.1
scaffold5074	Augustus	exon	16104	16232	.	-	.	ID=Dca44236.1.exon19;Parent=Dca44236.1
scaffold5074	Augustus	exon	16435	16532	.	-	.	ID=Dca44236.1.exon20;Parent=Dca44236.1
scaffold5074	Augustus	exon	16662	16773	.	-	.	ID=Dca44236.1.exon21;Parent=Dca44236.1
scaffold5074	Augustus	exon	17426	18157	.	-	.	ID=Dca44236.1.exon22;Parent=Dca44236.1
scaffold5074	Augustus	exon	19089	19265	.	-	.	ID=Dca44236.1.exon23;Parent=Dca44236.1