Carnation DB

Dca44303.1

Annotation

9-exons
f-1
sp|B9GWL5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_817614#unknown#0F0P0C
AT1G63780.1 | Symbols: IMP4 | Ribosomal RNA processing Brix domain protein | chr1:23665045-23667243 REVERSE LENGTH=294
Repeat List (scaffold509)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44303.1	1	293	293	83.61	293	84	1e-147
Target_name	Start	End	Length	Cov(%)
sp\|B9GWL5_POPTR	1	293	293	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44303.1	1	292	293	77.13	292	78	1e-136
Target_name	Start	End	Length	Cov(%)
Os08t0155000-01	1	292	294	99.31

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold509	Augus-PASA	mRNA	92015	97180	.	+	.	ID=Dca44303.1;Parent=Dca44303
scaffold509	Augus-PASA	exon	92015	92126	.	+	.	ID=Dca44303.1.exon1;Parent=Dca44303.1
scaffold509	Augus-PASA	exon	92226	92309	.	+	.	ID=Dca44303.1.exon2;Parent=Dca44303.1
scaffold509	Augus-PASA	exon	93364	93473	.	+	.	ID=Dca44303.1.exon3;Parent=Dca44303.1
scaffold509	Augus-PASA	exon	93576	93626	.	+	.	ID=Dca44303.1.exon4;Parent=Dca44303.1
scaffold509	Augus-PASA	exon	94455	94598	.	+	.	ID=Dca44303.1.exon5;Parent=Dca44303.1
scaffold509	Augus-PASA	exon	94693	94782	.	+	.	ID=Dca44303.1.exon6;Parent=Dca44303.1
scaffold509	Augus-PASA	exon	95777	95883	.	+	.	ID=Dca44303.1.exon7;Parent=Dca44303.1
scaffold509	Augus-PASA	exon	96508	96592	.	+	.	ID=Dca44303.1.exon8;Parent=Dca44303.1
scaffold509	Augus-PASA	exon	97082	97180	.	+	.	ID=Dca44303.1.exon9;Parent=Dca44303.1