Dca44307.1
Annotation
- 3-exons
- f-2
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|G0Y6U4_ARAHY#Retrotransposon gag protein#Arachis hypogaea (Peanut)#ORFNames=303L13_14#unknown#0F0P0C
- Repeat List (scaffold5090)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44307.1 |
4 |
576 |
807 |
32.34 |
573 |
41 |
3e-103
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
115 |
756 |
1717 |
37.39 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44307.1 |
363 |
455 |
807 |
3.71 |
93 |
33 |
1e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5090 |
Augustus |
mRNA |
1 |
2733 |
. |
+ |
. |
ID=Dca44307.1;Parent=Dca44307 |
| scaffold5090 |
Augustus |
exon |
1 |
1412 |
. |
+ |
. |
ID=Dca44307.1.exon1;Parent=Dca44307.1 |
| scaffold5090 |
Augustus |
exon |
1515 |
2075 |
. |
+ |
. |
ID=Dca44307.1.exon2;Parent=Dca44307.1 |
| scaffold5090 |
Augustus |
exon |
2282 |
2733 |
. |
+ |
. |
ID=Dca44307.1.exon3;Parent=Dca44307.1 |
