Dca44326.1
Annotation
- 4-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5097)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44326.1 |
82 |
634 |
634 |
53.78 |
553 |
60 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
493 |
1057 |
1313 |
43.03 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44326.1 |
108 |
343 |
634 |
15.77 |
236 |
42 |
4e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
484 |
723 |
1428 |
16.8 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5097 |
Augustus |
mRNA |
17647 |
20397 |
. |
- |
. |
ID=Dca44326.1;Parent=Dca44326 |
| scaffold5097 |
Augustus |
exon |
17647 |
18538 |
. |
- |
. |
ID=Dca44326.1.exon1;Parent=Dca44326.1 |
| scaffold5097 |
Augustus |
exon |
18753 |
19455 |
. |
- |
. |
ID=Dca44326.1.exon2;Parent=Dca44326.1 |
| scaffold5097 |
Augustus |
exon |
19634 |
19769 |
. |
- |
. |
ID=Dca44326.1.exon3;Parent=Dca44326.1 |
| scaffold5097 |
Augustus |
exon |
20224 |
20397 |
. |
- |
. |
ID=Dca44326.1.exon4;Parent=Dca44326.1 |
