Carnation DB

Dca44329.1

Annotation

6-exons
f-1
sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold5099)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44329.1	1	356	356	64.32	356	50	4e-119
Target_name	Start	End	Length	Cov(%)
sp\|G9FIF2_BETVU	483	949	1553	30.07

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44329.1	42	343	356	37.07	302	35	5e-62
Target_name	Start	End	Length	Cov(%)
Os12t0142900-02	179	562	707	54.31

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5099	Augustus	mRNA	568	3247	.	-	.	ID=Dca44329.1;Parent=Dca44329
scaffold5099	Augustus	exon	568	1188	.	-	.	ID=Dca44329.1.exon1;Parent=Dca44329.1
scaffold5099	Augustus	exon	1353	1765	.	-	.	ID=Dca44329.1.exon2;Parent=Dca44329.1
scaffold5099	Augustus	exon	1847	1877	.	-	.	ID=Dca44329.1.exon3;Parent=Dca44329.1
scaffold5099	Augustus	exon	1972	2628	.	-	.	ID=Dca44329.1.exon4;Parent=Dca44329.1
scaffold5099	Augustus	exon	2738	2802	.	-	.	ID=Dca44329.1.exon5;Parent=Dca44329.1
scaffold5099	Augustus	exon	2932	3247	.	-	.	ID=Dca44329.1.exon6;Parent=Dca44329.1