Carnation DB

Dca44458.1

Annotation

5-exons
f-1
sp|E0CQ32_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g12300#unknown#0F0P0C
Repeat List (scaffold5118)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44458.1	406	666	681	16.59	261	43	6e-45
Target_name	Start	End	Length	Cov(%)
sp\|E0CQ32_VITVI	9	258	278	89.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44458.1	411	667	681	14.97	257	40	9e-38
Target_name	Start	End	Length	Cov(%)
AT3G56870.1	449	684	700	33.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5118	Augus-PASA	mRNA	6711	9955	.	-	.	ID=Dca44458.1;Parent=Dca44458
scaffold5118	Augus-PASA	exon	6711	6902	.	-	.	ID=Dca44458.1.exon1;Parent=Dca44458.1
scaffold5118	Augus-PASA	exon	6991	7089	.	-	.	ID=Dca44458.1.exon2;Parent=Dca44458.1
scaffold5118	Augustus	exon	7594	8015	.	-	.	ID=Dca44458.1.exon3;Parent=Dca44458.1
scaffold5118	Augustus	exon	8514	8592	.	-	.	ID=Dca44458.1.exon4;Parent=Dca44458.1
scaffold5118	Augustus	exon	8702	9955	.	-	.	ID=Dca44458.1.exon5;Parent=Dca44458.1