Carnation DB

Dca44467.1

Annotation

6-exons
f-1
sp|B9GRK4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_816053#GO:0005634;GO:0019901;GO:0000079;GO:0006355#1F2P1C
Os12t0485400-01 Similar to Cyclin T1 (Fragment).
Repeat List (scaffold5119)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44467.1	28	420	420	45.47	393	46	1e-93
Target_name	Start	End	Length	Cov(%)
sp\|B9GRK4_POPTR	18	426	426	96

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44467.1	5	279	420	34.52	275	53	4e-87
Target_name	Start	End	Length	Cov(%)
Os12t0485400-01	18	281	544	48.52

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5119	Augustus	mRNA	47040	49999	.	+	.	ID=Dca44467.1;Parent=Dca44467
scaffold5119	Augustus	exon	47040	47260	.	+	.	ID=Dca44467.1.exon1;Parent=Dca44467.1
scaffold5119	Augustus	exon	47511	47592	.	+	.	ID=Dca44467.1.exon2;Parent=Dca44467.1
scaffold5119	Augustus	exon	48631	48765	.	+	.	ID=Dca44467.1.exon3;Parent=Dca44467.1
scaffold5119	Augustus	exon	48881	49056	.	+	.	ID=Dca44467.1.exon4;Parent=Dca44467.1
scaffold5119	Augustus	exon	49172	49323	.	+	.	ID=Dca44467.1.exon5;Parent=Dca44467.1
scaffold5119	Augustus	exon	49503	49999	.	+	.	ID=Dca44467.1.exon6;Parent=Dca44467.1