Dca44498.1
Annotation
- 3-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5121)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44498.1 |
5 |
830 |
832 |
57.69 |
826 |
53 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
411 |
1313 |
1313 |
68.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44498.1 |
110 |
276 |
832 |
6.97 |
167 |
33 |
1e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
467 |
645 |
1401 |
12.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5121 |
Augustus |
mRNA |
26508 |
29280 |
. |
+ |
. |
ID=Dca44498.1;Parent=Dca44498 |
| scaffold5121 |
Augustus |
exon |
26508 |
27264 |
. |
+ |
. |
ID=Dca44498.1.exon1;Parent=Dca44498.1 |
| scaffold5121 |
Augustus |
exon |
27411 |
28823 |
. |
+ |
. |
ID=Dca44498.1.exon2;Parent=Dca44498.1 |
| scaffold5121 |
Augustus |
exon |
28952 |
29280 |
. |
+ |
. |
ID=Dca44498.1.exon3;Parent=Dca44498.1 |
