Carnation DB

Dca445.1

Annotation

7-exons
f-1
sp|A5AFE2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041217#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Os01t0279700-02 Major facilitator superfamily protein.
Repeat List (scaffold1007)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca445.1	13	195	357	24.92	183	39	2e-34
Target_name	Start	End	Length	Cov(%)
sp\|A5AFE2_VITVI	2	226	1269	17.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca445.1	260	333	357	15.12	74	62	2e-20
Target_name	Start	End	Length	Cov(%)
AT2G29650.1	148	235	512	17.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1007	Augustus	mRNA	52532	59217	.	+	.	ID=Dca445.1;Parent=Dca445
scaffold1007	Augustus	exon	52532	52697	.	+	.	ID=Dca445.1.exon1;Parent=Dca445.1
scaffold1007	Augustus	exon	52869	53368	.	+	.	ID=Dca445.1.exon2;Parent=Dca445.1
scaffold1007	Augustus	exon	57590	57708	.	+	.	ID=Dca445.1.exon3;Parent=Dca445.1
scaffold1007	Augustus	exon	58087	58124	.	+	.	ID=Dca445.1.exon4;Parent=Dca445.1
scaffold1007	Augustus	exon	58236	58330	.	+	.	ID=Dca445.1.exon5;Parent=Dca445.1
scaffold1007	Augustus	exon	58554	58639	.	+	.	ID=Dca445.1.exon6;Parent=Dca445.1
scaffold1007	Augustus	exon	59148	59217	.	+	.	ID=Dca445.1.exon7;Parent=Dca445.1