Carnation DB

Dca44515.1

Annotation

7-exons
f-1
sp|D7LTS3_ARALL#tRNA/rRNA methyltransferase family protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_324780#GO:0003723;GO:0008173;GO:0006396#2F1P0C
Repeat List (scaffold5124)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44515.1	2	245	245	60.81	244	61	9e-85
Target_name	Start	End	Length	Cov(%)
sp\|D7LTS3_ARALL	18	260	260	93.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44515.1	44	206	245	45.71	163	69	4e-66
Target_name	Start	End	Length	Cov(%)
AT5G26880.1	67	224	368	42.93

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5124	Augustus	mRNA	16547	18773	.	-	.	ID=Dca44515.1;Parent=Dca44515
scaffold5124	Augustus	exon	16547	16825	.	-	.	ID=Dca44515.1.exon1;Parent=Dca44515.1
scaffold5124	Augustus	exon	17103	17156	.	-	.	ID=Dca44515.1.exon2;Parent=Dca44515.1
scaffold5124	Augustus	exon	17247	17307	.	-	.	ID=Dca44515.1.exon3;Parent=Dca44515.1
scaffold5124	Augustus	exon	17381	17439	.	-	.	ID=Dca44515.1.exon4;Parent=Dca44515.1
scaffold5124	Augustus	exon	17532	17600	.	-	.	ID=Dca44515.1.exon5;Parent=Dca44515.1
scaffold5124	Augustus	exon	18449	18552	.	-	.	ID=Dca44515.1.exon6;Parent=Dca44515.1
scaffold5124	Augustus	exon	18662	18773	.	-	.	ID=Dca44515.1.exon7;Parent=Dca44515.1