Dca44528.1
Annotation
- 2-exons
- f-1
- sp|B2BXJ4_ARALL#LTRGag-pol-polymerase 3#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#Name=LTR3#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold5129)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44528.1 |
144 |
447 |
447 |
31.31 |
304 |
46 |
2e-72
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B2BXJ4_ARALL |
349 |
654 |
1296 |
23.61 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44528.1 |
157 |
414 |
447 |
20.8 |
258 |
36 |
5e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0671800-01 |
268 |
525 |
573 |
45.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5129 |
Augustus |
mRNA |
10891 |
12302 |
. |
- |
. |
ID=Dca44528.1;Parent=Dca44528 |
| scaffold5129 |
Augustus |
exon |
10891 |
11805 |
. |
- |
. |
ID=Dca44528.1.exon1;Parent=Dca44528.1 |
| scaffold5129 |
Augustus |
exon |
11874 |
12302 |
. |
- |
. |
ID=Dca44528.1.exon2;Parent=Dca44528.1 |
