Carnation DB

Dca44539.1

Annotation

7-exons
f-1
sp|A9PI88_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0003824#1F0P0C
sp|B9S6E3_RICCO#Alpha/beta hydrolase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0535590#GO:0004091;GO:0080030;GO:0080032;GO:0080031;GO:0050253#5F0P0C
Repeat List (scaffold513)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44539.1	28	371	379	69.12	344	75	9e-159
Target_name	Start	End	Length	Cov(%)
sp\|A9PI88_POPTR	20	369	373	93.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44539.1	1	376	379	67.81	376	68	1e-150
Target_name	Start	End	Length	Cov(%)
AT4G36530.2	1	376	378	99.47

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold513	Augus-PASA	mRNA	84926	87321	.	+	.	ID=Dca44539.1;Parent=Dca44539
scaffold513	Augus-PASA	exon	84926	85034	.	+	.	ID=Dca44539.1.exon1;Parent=Dca44539.1
scaffold513	Augus-PASA	exon	85153	85254	.	+	.	ID=Dca44539.1.exon2;Parent=Dca44539.1
scaffold513	Augus-PASA	exon	85894	86032	.	+	.	ID=Dca44539.1.exon3;Parent=Dca44539.1
scaffold513	Augus-PASA	exon	86176	86346	.	+	.	ID=Dca44539.1.exon4;Parent=Dca44539.1
scaffold513	Augus-PASA	exon	86481	86721	.	+	.	ID=Dca44539.1.exon5;Parent=Dca44539.1
scaffold513	Augus-PASA	exon	86805	86896	.	+	.	ID=Dca44539.1.exon6;Parent=Dca44539.1
scaffold513	Augus-PASA	exon	87036	87321	.	+	.	ID=Dca44539.1.exon7;Parent=Dca44539.1